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产品信息
For optimal results, 50 ng–2 μg DNA is recommended.
Kit Components:
Each EpiMark Bisulfite Conversion Kit contains sufficient reagents to perform the bisulfite conversion reaction of 48 samples. Store at room temperature (15–20°C). However, for long-term storage (longer than 4 weeks) Desulphonation Reaction Buffer concentrate should be stored at 2–8°C. Prepared Bisulfite Mix can be stored at -20°C for up to six months.
- 产品类别:
- Discontinued (<3 years)
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特性和用法
需要但不提供的材料
Custom design primers
EpiMark Hot Start Taq DNA Polymerase (NEB #M0490) or other hot start DNA polymerase specific for bisulfite converted DNA.
Heat block or water bath (requiring temperatures of 65°C and 92°C)
96–100% molecular biology grade ethanol
PCR Thermal Cycler
0.2 ml strip tubes and caps
1.5 ml reaction tubes
Nuclease-free Water
Pipettors and pipette tips (for minimization of cross contamination, use aerosol
barrier tips) -
方法概述
方法概述
Many tools can be used to determine the methylaton status of DNA, including antibodies, methyl binding proteins, methylation-dependent restriction enzymes, and most recently next generation sequencing. However, the most commonly used technique to date is sodium bisulfite conversion, the “gold standard” for methylation analysis (3). Incubation of the target DNA with sodium bisulfite results in conversion of all unmodified cytosines to uracils leaving the modified bases (5-mC or 5-hmC) intact. (see Figure 1). The most critical step in methylation analysis using bisulfite conversion is the complete conversion of unmodified cytosines. This is achieved by alternating cycles of thermal denaturation with incubation reactions. The protocol optimized for this kit is simple and gives consistent results.
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相关产品
相关产品
- EpiMark® 热启动 Taq DNA 聚合酶
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参考文献
- Bestor, T.H., Verdine, G.L. (1994). Curr. Opin. Cell Biol. . 6, 380-389.
- Ooi, S.K., O’Donnell A.H., Bestor T.H. (2009). J. Cell Sci. 122, 2787-2791.
- Frommer, M., et. al. (1992). Proc. Natl. Acad. Sci. USA. 89, 1827-1831.
- Kumaki, Y., Oda, M. and Okano, M. (2008). Nucleic Acids Res. . 36,
操作说明、说明书 & 用法
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操作说明
- Reagent Preparation Using EpiMark® Bisulfite Conversion Kit (E3318)
- End-point PCR Using EpiMark® Bisulfite Conversion Kit (E3318)
- Cycling Protocol Using EpiMark™ Bisulfite Conversion Kit (E3318)
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说明书
产品说明书包含产品使用的详细信息、产品配方和质控分析。- manualE3318
工具 & 资源
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选择指南
- DNA Methylation Table
FAQs & 问题解决指南
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FAQs
- How should I store my bisulfite converted DNA after it is eluted from the column?
- Does my sample need to be free of RNA for bisulfite conversion?
- No PCR product is detected when I amplify more than 300 bp amplicon.
- Do I need extra purification of my mammalian DNA prep in order to use it in a bisulfite conversion reaction?
- Which DNA polymerase do you recommend for amplification of converted DNA?
- My thermocycler does not allow to set up the reaction volume to 140 μl, what I should do?
- What is the shelf life of the reagents supplied?